Document 0695 DOCN M9590695 TI Characterization of mg2+ - dependent endonucleolytic activity and development of a fluorescence assay for hiv-1 integrase in vitro. DT 9509 AU Lee SP; Kim HG; Censullo ML; Knutson JR; Han MK; Georgetown University Medical Center, Department of Biochemistry,; Washington, DC SO NIH Conf Retroviral Integrase. 1995 Jan 19-20;:(Participants' abstracts and posters, abstract no. 5). Unique Identifier : AIDSLINE AIDS/95920024 AB In vitro reactions of Human Immunodeficiency Virus-1 Integrase (HIV-IN) performed with short oligonucleotide substrates show a preference for Mn2+ as the catalytic cofactor. In contrast, studies with infected cell extracts show that viral DNA integration occurs in the presence of Mg2+. We report that changes in the structure and length of the oligonucleotide substrates alter the donor processing activity of HIV-IN to a Mg2+-dependent activity, thereby bringing both the in vivo and in vitro reactions into agreement. Furthermore, a novel mechanism (alternative disintegration) catalyzed by the endonuclease activity of HIV-IN is responsible for cleaving the junction between the viral and target sequences of the intermediate without rejoining the target strands. The Mg2+-dependent donor processing activity allows for the development of a rapid and continuous fluorescence assay for HIV-IN based on fluorescence resonance energy transfer (FRET). Steady-state fluorescence studies indicate the fluorescence cleavage assay monitored by the enhancement of the donor fluorescence is consistent with data obtained from the radioactive assay. This fluorescence assay will facilitate both detailed kinetic studies and rapid screening of HIV-1 integrase inhibitors. DE DNA Nucleotidyltransferases/*ANTAGONISTS & INHIB DNA, Complementary/GENETICS DNA, Viral/GENETICS HIV-1/*ENZYMOLOGY Immunodeficiency Virus, Feline/ENZYMOLOGY Leukemia Viruses, Murine/ENZYMOLOGY Oligopeptides/*PHARMACOLOGY Virus Integration/GENETICS MEETING ABSTRACT SOURCE: National Library of Medicine. NOTICE: This material may be protected by Copyright Law (Title 17, U.S.Code).