Document 0984 DOCN M9540984 TI Molecular aspects concerning antigen oligopeptide selection by MHC class I molecules. DT 9504 AU Drugarin D; Simon Z; Sulea T; Tatu CA; Department of Physiology, University of Medicine and Pharmacy,; Timisoara, Romania. SO Roum Arch Microbiol Immunol. 1993 Oct-Dec;52(4):267-75. Unique Identifier : AIDSLINE MED/95128009 AB T cells can recognize the antigen only if it is associated with self MHC molecules on the surface of antigen presenting cells (APC). There are several characteristic parameters defining interaction of MHC molecule with antigenic peptides giving circumstances for specific antigen presentation and an individualized immune response. Here are assessed some size and conformational parameters of the peptides presented by MHC class I molecules-lengths, widths, van der Waals volumes and surfaces-using COSMIC 2.0 software. The peptides derived from HIV gp 160 are obtained from literature and are known to be active and inactive in a cytotoxicity assay. An increased tendency for beta- or beta-like structures and volumes close to those of the MHC binding site are encountered in the case of active peptides. DE Amino Acid Sequence Antigen-Presenting Cells/IMMUNOLOGY Antigens/GENETICS/*IMMUNOLOGY Antigens, Surface/GENETICS/IMMUNOLOGY Gene Products, env/GENETICS/IMMUNOLOGY Genes, MHC Class I/GENETICS/*IMMUNOLOGY Human HIV Antigens/GENETICS/IMMUNOLOGY HIV-1/GENETICS/IMMUNOLOGY Ligands Molecular Sequence Data Oligopeptides/GENETICS/*IMMUNOLOGY Protein Precursors/GENETICS/IMMUNOLOGY T-Lymphocytes/*IMMUNOLOGY JOURNAL ARTICLE SOURCE: National Library of Medicine. NOTICE: This material may be protected by Copyright Law (Title 17, U.S.Code).